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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs7588595 chr2:101069397 G/A LOC285359 chr3:101431278-101432259:+ 0.36 6.8 3.14E-11 Box Plot
THCA rs7588737 chr2:223068821 A/T QDPR chr4:17461884-17513857:- -0.24 -5.9 6.99E-9 Box Plot
THCA rs7589793 chr2:113267124 C/T RGPD5 chr2:110550335-110615272:+ -0.48 -6.78 3.52E-11 Box Plot
THCA rs7589824 chr2:132216033 G/A CCDC74B chr2:130896860-130902707:- 0.39 6.76 3.92E-11 Box Plot
THCA rs75898875 chr12:25366300 T/C CSNK2A1P chr11:11373323-11374904:- -0.33 -6.16 1.55E-9 Box Plot
THCA rs7589946 chr2:114157455 C/T CBWD1 chr9:121038-179147:- -0.32 -6.1 2.14E-9 Box Plot
THCA rs7590395 chr2:132216540 G/A CCDC74B chr2:130896860-130902707:- 0.39 7.01 7.98E-12 Box Plot
THCA rs7590492 chr2:114157904 C/T CBWD1 chr9:121038-179147:- -0.32 -6.1 2.14E-9 Box Plot
THCA rs7590612 chr2:132216707 G/T CCDC74B chr2:130896860-130902707:- 0.37 6.99 9.37E-12 Box Plot
THCA rs75922924 chr5:75938227 G/A C9orf69 chr9:139006427-139010709:- -0.34 -5.92 6.22E-9 Box Plot
THCA rs75923496 chr14:39691593 G/GAC LOC647288 chr13:75811890-75814517:- 0.32 6.25 8.95E-10 Box Plot
THCA rs7592840 chr2:101078051 T/G LOC285359 chr3:101431278-101432259:+ 0.36 6.8 3.15E-11 Box Plot
THCA rs7593085 chr2:101078273 T/A LOC285359 chr3:101431278-101432259:+ 0.36 6.8 3.14E-11 Box Plot
THCA rs75932544 chr10:52025482 G/C FAM21B chr10:47894023-47949412:+ -0.37 -6.17 1.42E-9 Box Plot
THCA rs7593916 chr2:196037889 A/G CST6 chr11:65779312-65780976:+ 0.45 5.92 6.09E-9 Box Plot